Bionic Visualizations

Proteomaps
Proteomaps show the quantitative composition of proteomes. Each protein is represented by a polygon: areas reflect protein abundance, and functionally related proteins are arranged in common and similarly colored regions. For further reading please see www.proteomaps.net
organism?
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cushioning?
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Arabidopsis thaliana (Mousear cress)
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17676392922616
no comment
Arabidopsis thaliana (Mousear cress)
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17676392534336
no comment
Arabidopsis thaliana (Mousear cress)
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17676389342143
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17676300172395
no comment
Homo sapiens (Human)
no comment
17660696308618
no comment
Escherichia coli
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17656346492051
no comment
Escherichia coli
no comment
17656289288927
no comment
Escherichia coli
no comment
17656280971538
no comment
Escherichia coli
no comment
17656280688662
z3
Homo sapiens (Human)
z3
17654533772199
organism?
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Mus musculus (Mouse)
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17680407513486
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Mus musculus (Mouse)
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17680407513485
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Mus musculus (Mouse)
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17680382792673
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Mus musculus (Mouse)
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17680300920275
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Homo sapiens (Human)
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17680300225078
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Homo sapiens (Human)
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17680299325688
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Homo sapiens (Human)
no comment
17680297600428
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Homo sapiens (Human)
no comment
17680294484526
no comment
Homo sapiens (Human)
no comment
17680292311927
no comment
Homo sapiens (Human)
no comment
17680289846251
Before setting up an individual treemap template these issues need to be considered.
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user template previews
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17678925145753
no comment
up dead 24xxcoxx
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17678823031510
no comment
enteroccocus faecalis (adapted by U 22122025)
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17664314612752
no comment
VA season (adapted by L 18122025)
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17660494360004
no comment
Viscum album season
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17660491933389
no comment
ef_go
no comment
17658193007144
GO complete genome
Efaecalis Final UOH
GO complete genome
17654936421311
no comment
Efaecalis Final
no comment
17654928112030
no comment
Efaecalis_GO_Final
no comment
17654923648798
organism?
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cushioning?
no comment
L.A_BH10.2
no comment
17680457169177
Stress
L.A_BH10.2
Stress
17679544598778
c
L.A_BH10.2
c
17679512273588
stress
L.A_BH10.2
stress
17679504988506
crtl
L.A_BH10.2
crtl
17679502267941
no comment
L.A_BH10.2
no comment
17679491758673
E FUR 1.5
faecalis_KO
E FUR 1.5
17677985182204
WT E 1.5 UP
enteroccocus faecalis (adapted by U 22122025)
WT E 1.5 UP
17677984741522
WT D 1.5 UP
enteroccocus faecalis (adapted by U 22122025)
WT D 1.5 UP
17677978014489
WT D 1.5 UP
faecalis_KO
WT D 1.5 UP
17677976674150
This website and the underlying treemap algorithm is provided for non profit research or/and academic organisations only.
The space proportional algorithm for the generation of Voronoi Treemaps has been implemented within the DFG Research Initiative SFB Transregio34 Z1.
For commercial applications please contact DECODON.
For individual access please set up a collaboration within academic research efforts with Jörg Bernhardt.
The idea of comparable treemaps for different biological species was born in Dec 2012 in a collaborative effort of Ron Milo, Weizmann Institute of Science; Wolfram Liebermeister, Charité - Universitätsmedizin Berlin and Jörg Bernhardt, Universität Greifswald.

If you have used Proteomaps for your research please cite:
Liebermeister W., Noor E., Flamholz A., Davidi D., Bernhardt J., and Milo R. (2014), Visual account of protein investment in cellular functions, PNAS 111 (23), 8488-8493.
Otto, A., Bernhardt, J., Meyer, H., Schaffer, M., Herbst, F.-A., Siebourg, J., Mäder, U., Lalk, M., Hecker, M., and Becher, D. (2010). Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis.Nature Communications 1, 137.
Bernhardt J, Funke S, Hecker M, Siebourg J (2009) in Sixth International Symposium on Voronoi Diagrams, pp 233-241.
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