Bionic Visualizations

Proteomaps
Proteomaps show the quantitative composition of proteomes. Each protein is represented by a polygon: areas reflect protein abundance, and functionally related proteins are arranged in common and similarly colored regions. For further reading please see www.proteomaps.net
organism?
comment?
tsv file?
browse
or data?
Insert an example?
Please consider!
cushioning?
no comment
Homo sapiens (Human)
no comment
17660696308618
no comment
Escherichia coli
no comment
17656346492051
no comment
Escherichia coli
no comment
17656289288927
no comment
Escherichia coli
no comment
17656280971538
no comment
Escherichia coli
no comment
17656280688662
z3
Homo sapiens (Human)
z3
17654533772199
Z2
Homo sapiens (Human)
Z2
17654532334841
Z
Homo sapiens (Human)
Z
17654509989037
z1
Homo sapiens (Human)
z1
17654466768314
zxy1
Homo sapiens (Human)
zxy1
17654465702593
organism?
comment?
tsv file?
browse
or data?
Insert an example?
Please consider!
cushioning?
MUT MOCK WT MOCK DOWNREGULATED FC1 BRAIN
Mus musculus (Mouse)
MUT MOCK WT MOCK DOWNREGULATED FC1 BRAIN
17669215536169
no comment
Homo sapiens (Human)
no comment
17669214043461
B=MUT MOCK_WT MOCK DOWNREGULATED FC1 BRAIN
Mus musculus (Mouse)
B=MUT MOCK_WT MOCK DOWNREGULATED FC1 BRAIN
17669212219864
B=MUT UV_MUT MOCK UPREGULATED FC1 BRAIN
Mus musculus (Mouse)
B=MUT UV_MUT MOCK UPREGULATED FC1 BRAIN
17669122429388
B=WT MOCK_MUT MOCK UPREGULATED FC1 BRAIN
Mus musculus (Mouse)
B=WT MOCK_MUT MOCK UPREGULATED FC1 BRAIN
17669122429387
no comment
Homo sapiens (Human)
no comment
17669095745112
no comment
Homo sapiens (Human)
no comment
17669094182795
no comment
Homo sapiens (Human)
no comment
17669092926465
no comment
Homo sapiens (Human)
no comment
17669092601580
no comment
Homo sapiens (Human)
no comment
17669090349211
Before setting up an individual treemap template these issues need to be considered.
treemap name?
upload tmd file?
browse
edit tmd data?
Insert an example?
source?
db link?
comment?
user name?
user template previews
Save big while driving targeted traffic to your website with our AI-powered service, far more affordable than traditional paid ads. Contact us to see the difference.<br /><br />https://marketingaged.com/
Anita Carolan
Save big while driving targeted traffic to your website with our AI-powered service, far more affordable than traditional paid ads. Contact us to see the difference.

https://marketingaged.com/
17671836306443
Boost your Uni Greifswald De website’s traffic with AI! Watch this to learn more: https://www.youtube.com/shorts/iojvp6ZtjW4
Jodi Krieger
Boost your Uni Greifswald De website’s traffic with AI! Watch this to learn more: https://www.youtube.com/shorts/iojvp6ZtjW4
17671648111552
Attract high-quality visitors to your site with our AI-driven traffic solution, far more affordable than traditional paid advertising. Ready to boost your conversions?<br /><br />https://ow.ly/tQLO50XO1lJ
Cathern Falkiner
Attract high-quality visitors to your site with our AI-driven traffic solution, far more affordable than traditional paid advertising. Ready to boost your conversions?

https://ow.ly/tQLO50XO1lJ
17669477540269
no comment
enteroccocus faecalis (adapted by U 22122025)
no comment
17664314612752
no comment
VA season (adapted by L 18122025)
no comment
17660494360004
no comment
Viscum album season
no comment
17660491933389
no comment
ef_go
no comment
17658193007144
GO complete genome
Efaecalis Final UOH
GO complete genome
17654936421311
no comment
Efaecalis Final
no comment
17654928112030
no comment
Efaecalis_GO_Final
no comment
17654923648798
organism?
comment?
tsv file?
browse
or data?
Insert an example?
Please consider!
cushioning?
Van
enteroccocus faecalis (adapted by U 22122025)
Van
17670276541154
Cef
enteroccocus faecalis (adapted by U 22122025)
Cef
17670276131408
DS
L.A_BH10.2
DS
17664831192333
Crtl
L.A_BH10.2
Crtl
17664830995455
Van-Cef Total
enteroccocus faecalis (adapted by U 22122025)
Van-Cef Total
17664320602200
Cef Total
enteroccocus faecalis (adapted by U 22122025)
Cef Total
17664319670948
Van Total
enteroccocus faecalis (adapted by U 22122025)
Van Total
17664316512328
test2
VA season (adapted by L 18122025)
test2
17660514876251
test Y1
Viscum album season
test Y1
17660508603023
Cef Up
ef_go
Cef Up
17658202685953
This website and the underlying treemap algorithm is provided for non profit research or/and academic organisations only.
The space proportional algorithm for the generation of Voronoi Treemaps has been implemented within the DFG Research Initiative SFB Transregio34 Z1.
For commercial applications please contact DECODON.
For individual access please set up a collaboration within academic research efforts with Jörg Bernhardt.
The idea of comparable treemaps for different biological species was born in Dec 2012 in a collaborative effort of Ron Milo, Weizmann Institute of Science; Wolfram Liebermeister, Charité - Universitätsmedizin Berlin and Jörg Bernhardt, Universität Greifswald.

If you have used Proteomaps for your research please cite:
Liebermeister W., Noor E., Flamholz A., Davidi D., Bernhardt J., and Milo R. (2014), Visual account of protein investment in cellular functions, PNAS 111 (23), 8488-8493.
Otto, A., Bernhardt, J., Meyer, H., Schaffer, M., Herbst, F.-A., Siebourg, J., Mäder, U., Lalk, M., Hecker, M., and Becher, D. (2010). Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis.Nature Communications 1, 137.
Bernhardt J, Funke S, Hecker M, Siebourg J (2009) in Sixth International Symposium on Voronoi Diagrams, pp 233-241.
Privacy Policy