Bionic Visualizations

Proteomaps
Proteomaps show the quantitative composition of proteomes. Each protein is represented by a polygon: areas reflect protein abundance, and functionally related proteins are arranged in common and similarly colored regions. For further reading please see www.proteomaps.net
organism?
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cushioning?
no comment
Escherichia coli
no comment
17656346492051
no comment
Escherichia coli
no comment
17656289288927
no comment
Escherichia coli
no comment
17656280971538
no comment
Escherichia coli
no comment
17656280688662
z3
Homo sapiens (Human)
z3
17654533772199
Z2
Homo sapiens (Human)
Z2
17654532334841
Z
Homo sapiens (Human)
Z
17654509989037
z1
Homo sapiens (Human)
z1
17654466768314
zxy1
Homo sapiens (Human)
zxy1
17654465702593
zxy
Homo sapiens (Human)
zxy
17654460608610
organism?
comment?
tsv file?
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or data?
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no comment
Arabidopsis thaliana (Mousear cress)
no comment
17659466114729
H
Arabidopsis thaliana (Mousear cress)
H
17659465922055
N
Arabidopsis thaliana (Mousear cress)
N
17659465330448
L
Arabidopsis thaliana (Mousear cress)
L
17659416735930
HN
Arabidopsis thaliana (Mousear cress)
HN
17659403238329
NN
Arabidopsis thaliana (Mousear cress)
NN
17659402290598
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17659398926072
no comment
Homo sapiens (Human)
no comment
17659032990475
aa
Homo sapiens (Human)
aa
17658739900138
Trial6_53ul
Homo sapiens (Human)
Trial6_53ul
17658554908129
Before setting up an individual treemap template these issues need to be considered.
treemap name?
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user template previews
Hi, I found your website on Google and noticed your logo could be updated to match the quality of your brand. I’m a Fiverr Pro vetted logo designer with 6.4k reviews.<br /><br />If you'd like, I can create a new concept for you. No obligation you only pay if you feel it truly improves your brand.<br /><br />Here’s my work: https://tinyurl.com/portfolio-obus<br /><br />Obus
Obus C
Hi, I found your website on Google and noticed your logo could be updated to match the quality of your brand. I’m a Fiverr Pro vetted logo designer with 6.4k reviews.

If you'd like, I can create a new concept for you. No obligation you only pay if you feel it truly improves your brand.

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Obus
17659602807440
no comment
ef_go
no comment
17658193007144
no comment
GO_faecalis
no comment
17655740916938
no comment
GO_faecalis
no comment
17655740916937
no comment
GO_faecalis
no comment
17655740916936
GO complete genome
Efaecalis Final UOH
GO complete genome
17654936421311
no comment
Efaecalis Final
no comment
17654928112030
no comment
Efaecalis_GO_Final
no comment
17654923648798
no comment
cauris_calbicans9
no comment
17648075763474
no comment
cauris_calbicans9
no comment
17648075763473
organism?
comment?
tsv file?
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or data?
Insert an example?
Please consider!
cushioning?
Cef Up
ef_go
Cef Up
17658202685953
Cef Down
ef_go
Cef Down
17658202205609
Van UP
ef_go
Van UP
17658201763242
Van Down
ef_go
Van Down
17658201450274
SSA_mean
saccharomyces cerevisiae (adapted by TRA 03022019)
SSA_mean
17657963793961
no comment
Saccharomyces cerevisiae S288C
no comment
17657960881289
Cef Down
Efaecalis Final UOH
Cef Down
17655709575450
Cef Up
Efaecalis Final UOH
Cef Up
17655709542468
Van Down
Efaecalis Final UOH
Van Down
17655709499095
Van Up
Efaecalis Final UOH
Van Up
17655709430890
This website and the underlying treemap algorithm is provided for non profit research or/and academic organisations only.
The space proportional algorithm for the generation of Voronoi Treemaps has been implemented within the DFG Research Initiative SFB Transregio34 Z1.
For commercial applications please contact DECODON.
For individual access please set up a collaboration within academic research efforts with Jörg Bernhardt.
The idea of comparable treemaps for different biological species was born in Dec 2012 in a collaborative effort of Ron Milo, Weizmann Institute of Science; Wolfram Liebermeister, Charité - Universitätsmedizin Berlin and Jörg Bernhardt, Universität Greifswald.

If you have used Proteomaps for your research please cite:
Liebermeister W., Noor E., Flamholz A., Davidi D., Bernhardt J., and Milo R. (2014), Visual account of protein investment in cellular functions, PNAS 111 (23), 8488-8493.
Otto, A., Bernhardt, J., Meyer, H., Schaffer, M., Herbst, F.-A., Siebourg, J., Mäder, U., Lalk, M., Hecker, M., and Becher, D. (2010). Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis.Nature Communications 1, 137.
Bernhardt J, Funke S, Hecker M, Siebourg J (2009) in Sixth International Symposium on Voronoi Diagrams, pp 233-241.
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