Bionic Visualizations
Proteomaps
Proteomaps show the quantitative composition of proteomes. Each protein is represented by a polygon: areas reflect protein abundance, and functionally related proteins are arranged in common and similarly colored regions. For further reading please see www.proteomaps.net
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Seknzm-3
Saccharomyces cerevisiae (Baker's yeast)
Seknzm-3
15372381559904
Seknzm-2
Saccharomyces cerevisiae (Baker's yeast)
Seknzm-2
15372380354828
Seknzm-1
Saccharomyces cerevisiae (Baker's yeast)
Seknzm-1
15372379726301
no comment
Homo sapiens (Human)
no comment
15348722559924
no comment
Homo sapiens (Human)
no comment
15348711960584
no comment
Saccharomyces cerevisiae (Baker's yeast)
no comment
15339489734799
no comment
Saccharomyces cerevisiae (Baker's yeast)
no comment
15339489622050
no comment
Saccharomyces cerevisiae (Baker's yeast)
no comment
15339383097090
no comment
Saccharomyces cerevisiae (Baker's yeast)
no comment
15339382967780
no comment
Synechocystis species 6803 (Cyanobacterium)
no comment
15336534192533
organism?
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runterregulierte Proteine bei Aktivierung in angereichertem Zustand ohne Filter
Homo sapiens (Human)
runterregulierte Proteine bei Aktivierung in angereichertem Zustand ohne Filter
15373512051732
5dC_Resistant
Homo sapiens (Human)
5dC_Resistant
15373508417597
Control_Resistant
Homo sapiens (Human)
Control_Resistant
15373508399212
hochregulierte Proteine bei Aktivierung in angereichertem Zustand ohne Filter
Homo sapiens (Human)
hochregulierte Proteine bei Aktivierung in angereichertem Zustand ohne Filter
15373507082896
Control_5dC
Homo sapiens (Human)
Control_5dC
15373506578537
no comment
Homo sapiens (Human)
no comment
15373486986999
hochregulierte Proteine bei Aktivierung in angereichertem Zustand
Homo sapiens (Human)
hochregulierte Proteine bei Aktivierung in angereichertem Zustand
15373480213418
hochreguliert durch Anreicherung in aktiviertem Zustand
Homo sapiens (Human)
hochreguliert durch Anreicherung in aktiviertem Zustand
15373461489190
no comment
Saccharomyces cerevisiae (Baker's yeast)
no comment
15372568146087
no comment
Schizosaccharomyces pombe (Fission yeast)
no comment
15372346586115
Before setting up an individual treemap template these issues need to be considered.
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user template previews
no comment
Animal biomass with birds, humans unclassified (adapted by YBO 13092016)
no comment
15372980545129
no comment
Animal biomass with birds (adapted by YBO 13092016) (adapted by N 18092018) (adapted by N 18092018)
no comment
15372979229701
no comment
world kingdom biomass (adapted by N 18092018)
no comment
15372889488328
no comment
Animal biomass with birds (adapted by YBO 13092016) (adapted by N 18092018)
no comment
15370471239431
mouse with transgene
Mouse_recombinant_ck (adapted by C 10092018)
mouse with transgene
15366148287576
10
Human Cells rates 180910
10
15365824382854
5 layers
Human Cells rates 180908
5 layers
15364199735384
no comment
Human Cells rates - 4 layer (02092018)
no comment
15359187432807
no comment
Human Cells rates 180902
no comment
15358322831338
hepatocytes moved
Human Cells rates - updated
hepatocytes moved
15358316959463
organism?
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no comment
Animal biomass with birds, humans unclassified (adapted by YBO 13092016)
no comment
15372988914447
no comment
Animal biomass with birds (adapted by YBO 13092016) (adapted by N 18092018) (adapted by N 18092018)
no comment
15372980371057
no comment
Animal biomass with birds (adapted by YBO 13092016) (adapted by N 18092018)
no comment
15372974133146
no comment
world kingdom biomass (adapted by N 18092018)
no comment
15372892805037
no comment
world kingdom biomass
no comment
15372888803819
no comment
11
no comment
15372560656991
tg_all_producers
Mouse_recombinant_ck (adapted by C 10092018)
tg_all_producers
15366435966805
no amount
Mouse_recombinant_ck (adapted by C 10092018)
no amount
15366273834350
mouse turnover
Human Cells rates 180910
mouse turnover
15365831070669
human cell #
Human Cells rates 180910
human cell #
15365830807383
This website and the underlying treemap algorithm is provided for non profit research or/and academic organisations only.
The space proportional algorithm for the generation of Voronoi Treemaps has been implemented within the DFG Research Initiative SFB Transregio34 Z1.
For commercial applications please contact DECODON GmbH.
For individual access please set up a collaboration within academic research efforts with Jörg Bernhardt.
The idea of comparable treemaps for different biological species was born in Dec 2012 in a collaborative effort of Ron Milo, Weizmann Institute of Science; Wolfram Liebermeister, Charité - Universitätsmedizin Berlin and Jörg Bernhardt, Universität Greifswald.

If you have used Proteomaps for your research please cite:
Liebermeister W., Noor E., Flamholz A., Davidi D., Bernhardt J., and Milo R. (2014), Visual account of protein investment in cellular functions, PNAS 111 (23), 8488-8493.
Otto, A., Bernhardt, J., Meyer, H., Schaffer, M., Herbst, F.-A., Siebourg, J., Mäder, U., Lalk, M., Hecker, M., and Becher, D. (2010). Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis.Nature Communications 1, 137.
Bernhardt J, Funke S, Hecker M, Siebourg J (2009) in Sixth International Symposium on Voronoi Diagrams, pp 233-241.
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