Bionic Visualizations

Proteomaps
Proteomaps show the quantitative composition of proteomes. Each protein is represented by a polygon: areas reflect protein abundance, and functionally related proteins are arranged in common and similarly colored regions. For further reading please see www.proteomaps.net
organism?
comment?
tsv file?
browse
or data?
Insert an example?
Please consider!
cushioning?
no comment
Escherichia coli
no comment
17656346492051
no comment
Escherichia coli
no comment
17656289288927
no comment
Escherichia coli
no comment
17656280971538
no comment
Escherichia coli
no comment
17656280688662
z3
Homo sapiens (Human)
z3
17654533772199
Z2
Homo sapiens (Human)
Z2
17654532334841
Z
Homo sapiens (Human)
Z
17654509989037
z1
Homo sapiens (Human)
z1
17654466768314
zxy1
Homo sapiens (Human)
zxy1
17654465702593
zxy
Homo sapiens (Human)
zxy
17654460608610
organism?
comment?
tsv file?
browse
or data?
Insert an example?
Please consider!
cushioning?
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17655972977327
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17655969887068
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17655969589550
no comment
Homo sapiens (Human)
no comment
17655775141638
no comment
Homo sapiens (Human)
no comment
17655774852365
no comment
Homo sapiens (Human)
no comment
17655405724166
no comment
Homo sapiens (Human)
no comment
17655405586442
no comment
Homo sapiens (Human)
no comment
17655404276059
LN
Arabidopsis thaliana (Mousear cress)
LN
17655292655526
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17655290768931
Before setting up an individual treemap template these issues need to be considered.
treemap name?
upload tmd file?
browse
edit tmd data?
Insert an example?
source?
db link?
comment?
user name?
user template previews
no comment
GO_faecalis
no comment
17655740916938
no comment
GO_faecalis
no comment
17655740916937
no comment
GO_faecalis
no comment
17655740916936
no comment
E_faecalis v583 UOH
no comment
17655731404756
Boost your website’s audience with our AI-powered traffic service, delivering targeted visitors at a lower cost than paid ads. Contact us today.<br /><br />https://ow.ly/5gmu50XH7io
Wiley Amador
Boost your website’s audience with our AI-powered traffic service, delivering targeted visitors at a lower cost than paid ads. Contact us today.

https://ow.ly/5gmu50XH7io
17655233086303
GO complete genome
Efaecalis Final UOH
GO complete genome
17654936421311
no comment
Efaecalis Final
no comment
17654928112030
no comment
Efaecalis_GO_Final
no comment
17654923648798
no comment
Efaecalis_GO_color
no comment
17654879311874
no comment
Efaecalis_GO
no comment
17654873411478
organism?
comment?
tsv file?
browse
or data?
Insert an example?
Please consider!
cushioning?
Cef Down
Efaecalis Final UOH
Cef Down
17655709575450
Cef Up
Efaecalis Final UOH
Cef Up
17655709542468
Van Down
Efaecalis Final UOH
Van Down
17655709499095
Van Up
Efaecalis Final UOH
Van Up
17655709430890
Van Down
Efaecalis Final
Van Down
17655705101285
van Up
Efaecalis Final UOH
van Up
17655702050761
Van Down
Efaecalis Final UOH
Van Down
17655699075442
Van Down
Efaecalis_GO_Final
Van Down
17655442459967
no comment
Arabidopsis thaliana (version 2.0) (adapted by Z 12112019)
no comment
17655307628800
no comment
kegg_cl
no comment
17649602553505
This website and the underlying treemap algorithm is provided for non profit research or/and academic organisations only.
The space proportional algorithm for the generation of Voronoi Treemaps has been implemented within the DFG Research Initiative SFB Transregio34 Z1.
For commercial applications please contact DECODON.
For individual access please set up a collaboration within academic research efforts with Jörg Bernhardt.
The idea of comparable treemaps for different biological species was born in Dec 2012 in a collaborative effort of Ron Milo, Weizmann Institute of Science; Wolfram Liebermeister, Charité - Universitätsmedizin Berlin and Jörg Bernhardt, Universität Greifswald.

If you have used Proteomaps for your research please cite:
Liebermeister W., Noor E., Flamholz A., Davidi D., Bernhardt J., and Milo R. (2014), Visual account of protein investment in cellular functions, PNAS 111 (23), 8488-8493.
Otto, A., Bernhardt, J., Meyer, H., Schaffer, M., Herbst, F.-A., Siebourg, J., Mäder, U., Lalk, M., Hecker, M., and Becher, D. (2010). Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis.Nature Communications 1, 137.
Bernhardt J, Funke S, Hecker M, Siebourg J (2009) in Sixth International Symposium on Voronoi Diagrams, pp 233-241.
Privacy Policy