Bionic Visualizations

Proteomaps
Proteomaps show the quantitative composition of proteomes. Each protein is represented by a polygon: areas reflect protein abundance, and functionally related proteins are arranged in common and similarly colored regions. For further reading please see www.proteomaps.net
organism?
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cushioning?
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17676392922616
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17676392534336
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17676389342143
no comment
Arabidopsis thaliana (Mousear cress)
no comment
17676300172395
no comment
Homo sapiens (Human)
no comment
17660696308618
no comment
Escherichia coli
no comment
17656346492051
no comment
Escherichia coli
no comment
17656289288927
no comment
Escherichia coli
no comment
17656280971538
no comment
Escherichia coli
no comment
17656280688662
z3
Homo sapiens (Human)
z3
17654533772199
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no comment
Homo sapiens (Human)
no comment
17677453102604
no comment
Homo sapiens (Human)
no comment
17677452953057
skin enriched in wt mock fc-2*-1
Mus musculus (Mouse)
skin enriched in wt mock fc-2*-1
17677186651212
pit enriched in wt mock fc2*-1
Mus musculus (Mouse)
pit enriched in wt mock fc2*-1
17677177974738
pit enriched in wt mock fc2
Mus musculus (Mouse)
pit enriched in wt mock fc2
17677176537638
pit enriched in wt mock fc2
Mus musculus (Mouse)
pit enriched in wt mock fc2
17677176537637
pit enriched in mut UVB fc2*-1
Mus musculus (Mouse)
pit enriched in mut UVB fc2*-1
17677176420942
pit enriched in mut mock fc2
Mus musculus (Mouse)
pit enriched in mut mock fc2
17677165492570
skin enriched in mut uvb fc2*-1
Mus musculus (Mouse)
skin enriched in mut uvb fc2*-1
17677163013348
skin enriched in wt mock fc2
Mus musculus (Mouse)
skin enriched in wt mock fc2
17677160362613
Before setting up an individual treemap template these issues need to be considered.
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17675712769774
no comment
1 (adapted by S 040120261
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17675180707347
no comment
11 (adapted by E 13032025) (adapted by S 0401202
no comment
17675178349133
no comment
11 (adapted by E 13032025) (adapted by S 04012026)
no comment
17675159420627
no comment
1 (adapted by S 04012026)
no comment
17675138765168
no comment
enteroccocus faecalis (adapted by U 22122025)
no comment
17664314612752
no comment
VA season (adapted by L 18122025)
no comment
17660494360004
no comment
Viscum album season
no comment
17660491933389
no comment
ef_go
no comment
17658193007144
organism?
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E FUR 1.5
faecalis_KO
E FUR 1.5
17677274000718
D FUR 1.5
faecalis_KO
D FUR 1.5
17677267025441
WT E 1.5
faecalis_KO
WT E 1.5
17677266472012
D WT 1.5
faecalis_KO
D WT 1.5
17677263515621
no comment
faecalis_KO
no comment
17677262341391
WT E 1.5
enteroccocus faecalis (adapted by U 22122025)
WT E 1.5
17677261796550
D WT 1.5
enteroccocus faecalis (adapted by U 22122025)
D WT 1.5
17677259106806
no comment
enteroccocus faecalis (adapted by U 22122025)
no comment
17677249758396
no comment
enteroccocus faecalis (adapted by U 22122025)
no comment
17677240900016
no comment
enteroccocus faecalis (adapted by U 22122025)
no comment
17676407507973
This website and the underlying treemap algorithm is provided for non profit research or/and academic organisations only.
The space proportional algorithm for the generation of Voronoi Treemaps has been implemented within the DFG Research Initiative SFB Transregio34 Z1.
For commercial applications please contact DECODON.
For individual access please set up a collaboration within academic research efforts with Jörg Bernhardt.
The idea of comparable treemaps for different biological species was born in Dec 2012 in a collaborative effort of Ron Milo, Weizmann Institute of Science; Wolfram Liebermeister, Charité - Universitätsmedizin Berlin and Jörg Bernhardt, Universität Greifswald.

If you have used Proteomaps for your research please cite:
Liebermeister W., Noor E., Flamholz A., Davidi D., Bernhardt J., and Milo R. (2014), Visual account of protein investment in cellular functions, PNAS 111 (23), 8488-8493.
Otto, A., Bernhardt, J., Meyer, H., Schaffer, M., Herbst, F.-A., Siebourg, J., Mäder, U., Lalk, M., Hecker, M., and Becher, D. (2010). Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis.Nature Communications 1, 137.
Bernhardt J, Funke S, Hecker M, Siebourg J (2009) in Sixth International Symposium on Voronoi Diagrams, pp 233-241.
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